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International Cancer Genome Consortium

From Wikipedia, the free encyclopedia

The International Cancer Genome Consortium (ICGC) is a voluntary scientific organization that provides a forum for collaboration among the world's leading cancer and genomic researchers. The ICGC was launched in 2008 to coordinate large-scale cancer genome studies in tumours from 50 cancer types and/or subtypes that are of main importance across the globe.

Systematic studies of more than 25,000 cancer genomes at the genomic, epigenomic and transcriptomic levels will reveal the repertoire of oncogenic mutations, uncover traces of the mutagenic influences, define clinically relevant subtypes for prognosis and therapeutic management, and enable the development of new cancer therapies.[1]

The ICGC incorporates data from The Cancer Genome Atlas (TCGA) and the Sanger Cancer Genome Project.

Professor Andrew Biankin AO, Regius Professor and Director of the Wolfson Wohl Cancer Research Centre at the University of Glasgow has been Executive Director and Chairman from 2018.[2]

Goals

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The ICGC is one of the most ambitious biomedical research efforts since the Human Genome Project. The consortium will help to coordinate current and future large-scale projects to understand the genomic changes involved in cancers of global concern. The catalogues produced by ICGC members will be made rapidly and freely available to qualified researchers, which will enable scientists around the globe to use the new information to develop better ways of diagnosing, treating and preventing many types of cancer.[citation needed]

The aim of the ICGC is to provide a comprehensive description of the somatic (non-inherited) genomic abnormalities present in the broad range of human tumors. Given our current knowledge of the heterogeneity of tumor types and subtypes, the ICGC set a goal of coordinating approximately 50 projects, each of which will generate the genomic analyses on approximately 500 cancer samples of each class. It is well recognized, however, that cancer is highly heterogeneous and hundreds of types/subtypes can be defined. Therefore, the stated goal of 50 ICGC projects is not intended to, and cannot, exhaustively cover the full spectrum of cancer types.[citation needed]

ICGC Funding and Research members proposing a project must agree to the ICGC’s policies, which include requirements for rapid data release, for rigorous quality standards and for protection of study participants.[citation needed]

Structure and funding

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ICGC is funded by participating nations, each of which focuses on one or more forms of cancer, with the goal of mapping the genomes of at least 50 types of cancer.[3] The consortium's secretariat is at the Ontario Institute for Cancer Research in Toronto, Canada,[4] which will also operate the data coordination center. The provincial Government of Ontario provided funding of $40 million, and each participating funding member is expected to contribute $20 million toward each project. In 2009 the German Cancer Aid supported one ICGC-project with 7.9 million Euro. This was the highest amount a private organization gave. The money is donated by German people.[citation needed]

ICGC membership is open to all entities that agree to follow its principles and guidelines. The ICGC has received commitments from funding organizations in Asia, Australia, Europe and North America for 47 project teams in 15 jurisdictions to study over 21,000 tumor genomes. Projects that are currently funded are examining tumors affecting the bladder, blood, bone, brain, breast, cervix, colon, head and neck, kidney, liver, lung, oral cavity, ovary, pancreas, prostate, rectum, skin, soft tissues, stomach, thyroid and uterus. Over time, additional nations and organizations are anticipated to join the ICGC. The genomic analyses of tumors conducted by ICGC members in Australia and Canada (pancreatic cancer), China (gastric cancer), France (liver cancer), Germany (brain cancer), Japan (liver cancer), Spain (blood cancer), the UK (blood, breast, lung and skin cancer) and the USA (blood, brain, breast, colon, kidney, lung, ovarian, rectal, stomach and uterine cancer) are now available through the Data Coordination Center housed on the ICGC website.[citation needed]

Members of the executive committee

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Representatives with observer status:

Current research projects

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Each participating country has a particular tumor type as its primary research target:[5]

Future work

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ICGCmed

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Within the context of massive international sequencing efforts, and in anticipation of the new era of precision medicine, The International Cancer Genome Consortium for Medicine (ICGCmed) will link the wealth of genomic data already amassed, as well as new genomic data being generated, to clinical and health information, including lifestyle, patient history, cancer diagnostic data, and response to and survival following to therapies, across the cancer spectrum. Using this large-scale integrated data, researchers, scientists, policymakers and clinicians will be able to work with patients, healthcare providers and others to develop preventative strategies, markers for early detection of disease, more specific criteria and methods for diagnoses and prognoses, and interventions based on matching the patient’s disease molecular subtype with the most effective combinations of therapies.

This will lead to the discovery of new therapeutic targets, more precise disease definitions and improved strategies to prevent drug resistance.

See also

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References

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  1. ^ Hudson TJ, et al. (April 2010). "International network of cancer genome projects". Nature. 464 (7291): 993–8. Bibcode:2010Natur.464..993T. doi:10.1038/nature08987. PMC 2902243. PMID 20393554.
  2. ^ "ICGC Homepage announcement 16 May 2018".
  3. ^ "Scientists Form International Cancer Genome Consortium". National Institutes of Health. 2008-04-29. Retrieved 2008-04-29.
  4. ^ Ogilvie M (2008-04-29). "Toronto-based consortium to seek cancer's genetic origins". Toronto Star. Archived from the original on 2008-05-02. Retrieved 2008-04-29.
  5. ^ "The International Cancer Genome Consortium announces the launch of 8 Cancer Genome Projects" (PDF). Archived from the original (PDF) on 2011-07-26. Retrieved 2010-06-26.
  6. ^ Australia National Health and Medical Research Council announcement Archived 2009-03-23 at the Wayback Machine
  7. ^ ICGC Project Website
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